Okay I'm at a loss here... I recently made some changes to my map, saved it, compiled and came back later to try the map. I had to rebuild the cubemaps showing that something changed, but I didn't understand because it was the same map as it was before the changes/fixes.
So I figured okay maybe I screwed something up... I deleted the .bsp in my counter-strike source folder and then double checked that I had the right map opened in hammer and compiled again. I come back later and it did the same thing. Had to rebuild cubemaps yet it was the same, old, version of the map.