Ok, I think I've fixed that problem, now another one arises. This one I've had many times and sure its easy to fix, it keeps saying it cant find the Wad files (halflife.wad) I've had this one many times before and it was by luck that I got it working a few hours later and never rememberd how.
EDIT- I use zoner's half life tools and use nems batch compiler, dont know if it has anything to do with it though.
EDIT2- I got it to work, thanks for the help